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Thread: Trying The New Big WUs

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  1. #11
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    Join Date
    Jul 2007
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    Germany
    Posts
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    Thank you road-runner, I see that you caught one of these INTERRUPTED errors too, followed by CoreStatus = FF (255). What could that be? Any leads?

    Edit: I see you have -smp 8 -bigadv twice?

    Not FAHlog, but that's what's dumped in the console:

    Code:
    Launch directory: /home/p2501/FOLDING/CPU
    Executable: ./fah6
    Arguments: -smp 8 -bigadv -verbosity 9 
    
    [15:51:15] - Ask before connecting: No
    [15:51:15] - User name: p2501 (Team 36362)
    [15:51:15] - User ID: 7B261D704F7A2526
    [15:51:15] - Machine ID: 1
    [15:51:15] 
    [15:51:15] Loaded queue successfully.
    [15:51:15] 
    [15:51:15] - Autosending finished units... [September 6 15:51:15 UTC]
    [15:51:15] + Processing work unit
    [15:51:15] Trying to send all finished work units
    [15:51:15] Core required: FahCore_a2.exe
    [15:51:15] + No unsent completed units remaining.
    [15:51:15] - Autosend completed
    [15:51:15] Core found.
    [15:51:15] Working on queue slot 04 [September 6 15:51:15 UTC]
    [15:51:15] + Working ...
    [15:51:15] - Calling './mpiexec -np 8 -host 127.0.0.1 ./FahCore_a2.exe -dir work/ -nice 19 -suffix 04 -checkpoint 15 -verbose -lifeline 2378 -version 624'
    
    [15:51:15] 
    [15:51:15] *------------------------------*
    [15:51:15] Folding@Home Gromacs SMP Core
    [15:51:15] Version 2.10 (Sun Aug 30 03:43:28 CEST 2009)
    [15:51:15] 
    [15:51:15] Preparing to commence simulation
    [15:51:15] - Ensuring status. Please wait.
    [15:51:18] Called DecompressByteArray: compressed_data_size=30332671 data_size=159726549, decompressed_data_size=159726549 diff=0
    [15:51:18] 9726549, decompressed_data_size=159726549 diff=0
    [15:51:19] 2, Clone 5, Gen 29)
    [15:51:19] 
    [15:51:19] erified
    [15:51:19] 
    [15:51:19] Project: 2681 (Run 2, Clone 5, Gen 29)
    [15:51:19] 
    [15:51:20] M.D.
    [15:51:20] ing M.D.
    [15:51:30] Clone 5, Gen 29)
    [15:51:30] 
    [15:51:30] Entering M.D.
    NNODES=8, MYRANK=0, HOSTNAME=wintermute
    NNODES=8, MYRANK=3, HOSTNAME=wintermute
    NNODES=8, MYRANK=5, HOSTNAME=wintermute
    NODEID=0 argc=20
    NNODES=8, MYRANK=6, HOSTNAME=wintermute
    NNODES=8, MYRANK=7, HOSTNAME=wintermute
    NNODES=8, MYRANK=4, HOSTNAME=wintermute
    NODEID=4 argc=20
    NODEID=6 argc=20
    NODEID=7 argc=20
    NNODES=8, MYRANK=1, HOSTNAME=wintermute
    NODEID=1 argc=20
    NODEID=5 argc=20
    Reading file work/wudata_04.tpr, VERSION 3.3.99_development_20070618 (single precision)
    NNODES=8, MYRANK=2, HOSTNAME=wintermute
    NODEID=2 argc=20
    NODEID=3 argc=20
    Note: tpx file_version 48, software version 68
    
    NOTE: The tpr file used for this simulation is in an old format, for less memory usage and possibly more performance create a new tpr file with an up to date version of grompp
    
    Making 1D domain decomposition 8 x 1 x 1
    starting mdrun 'SINGLE VESICLE in water'
    7500000 steps,  30000.0 ps (continuing from step 7250000,  29000.0 ps).
    [15:51:50]  (0%)
    Last edited by p2501; 09-06-2009 at 07:53 AM.

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