Could you distinguish the HT ports from PCIe Lanes/ports ?
AMD earlier said that Fusion parts will come with PCIe Gen 2, only. So there should not be any Hypertransport at all.
http://xtreview.com/images/amd%20cguo%2002.jpg
There are also no NB chipsets mentioned in the table from above, only a SB part (Hudson).
Thus the ports that you named HT2 & HT3 are probably PCIe connectors that could be used for a dedicated graphic card (2x x8).
Another link will be probably used to connect to the southbridge, ATIs ALink is nothing more then a relabeled PCIe.
The last link could be used for anything else, PCIe x1 Slots, onboard chips, etc.
Furthermore the square die area below HT2 and HT3 and above HT4: Could that be the PCIe logic ?
cheers