I do not know if this will help you achieve what you want but if you are using the repository install you can stop boinc-client from doing any scheduling here.
Code:
/etc/default/boinc-client
# This file is /etc/default/boinc-client, it is a configuration file for the
# /etc/init.d/boinc-client init script.
# Set this to 1 to enable and to 0 to disable the init script.
ENABLED="1"
# Set this to 1 to enable advanced scheduling of the BOINC core client and
# all its sub-processes (reduces the impact of BOINC on the system's
# performance).
SCHEDULE="1"
# The BOINC core client will be started with the permissions of this user.
BOINC_USER="boinc"
# This is the data directory of the BOINC core client.
BOINC_DIR="/var/lib/boinc-client"
# This is the location of the BOINC core client, that the init script uses.
# If you do not want to use the client program provided by the boinc-client
# package, you can specify here an alternative client program.
#BOINC_CLIENT="/usr/local/bin/boinc"
BOINC_CLIENT="/usr/bin/boinc"
# Here you can specify additional options to pass to the BOINC core client.
# Type 'boinc --help' or 'man boinc' for a full summary of allowed options.
#BOINC_OPTS="--allow_remote_gui_rpc"
BOINC_OPTS=""
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