Me myself would never buy an atomiatic controller based on a software solution. Been down that road to many times. Suddenly the manufactuerer dicedes to drop development and you're stuck with whatever OS you have. And what about running another OS then Windows? Sure, quite a few out there can't see themselves running other OS:es today, but in just a few years the market will be very different.
This is beside the fact that you are totally dependent on the OS funtionality. Say for example that you have en electrical error, caused by lightning, faulty wiring in your building or just a bad power supply. You OS could easily become unstable and hang long before your pump dies. Then you are toast. An OS-independet device with micro controller on board (like Aquaero or mcubed) will not fail in this situation...
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