I was using an older version of Prime95 when I originally tested that so I'll go try it again with version 25.9.
What operating system are you running and what CPU and what MHz and etc. Give me some details so I can see if there is anything on my side that might be causing this problem. What temperature do you max out at when testing?
Edit: I just ran a Cool Down Test using Vista 32 bit and Prime95 25.9 and there weren't any problems.
http://img132.imageshack.us/img132/2...ldownstart.png
At the end of Test #8, it displayed "Stopping Prime 95", Prime95 stopped and disappeared from the screen. The only thing left was the green Prime95 system tray icon but when I moused over it, that disappeared too. Test #9 started after that and then Test #10 and then it was done.
http://img193.imageshack.us/img193/2057/cooldownend.png
I can't think of anything I changed recently that controls the shut down of Prime95 but I'll definitely have a look at the code. This is the first time I've heard of this issue. I'll also try and check Windows 7 x64 later tonight.
Edit: In Windows 7 beta Build 7000, the test ran fine as well. The only difference was that the system tray icon disappeared automatically like it is supposed to do.
Thanks MS for finally fixing that. :)
http://img46.imageshack.us/img46/9192/prime95test.png
If you have any more issues let me know.